SegAnnDB sign-in button

List of detected alterations for profile GSM314026. Back to home.

Before clicking the UCSC links below, make sure to

annotation chr start end size in kb UCSC zoom out 3x UCSC zoom out 10x
1breakpoint 1 48863365 48889599 26 chr1:48837131-48915833 chr1:48745312-49007652
loss 1 48876482 51851074 2974 chr1:45901890-54825666 chr1:35490818-65236738
1breakpoint 1 51797643 51904505 106 chr1:51690781-52011367 chr1:51316764-52385384
1breakpoint 1 144945033 144956393 11 chr1:144933673-144967753 chr1:144893913-145007513
gain 1 144950713 249143646 104192 chr1:40757780-353336578 chr1:1-718011844
1breakpoint 2 15559198 15569376 10 chr2:15549020-15579554 chr2:15513397-15615177
amplification 2 15564287 16969206 1404 chr2:14159368-18374124 chr2:9242151-23291341
1breakpoint 2 16956534 16981878 25 chr2:16931190-17007222 chr2:16842486-17095926
1breakpoint 2 17021774 17037809 16 chr2:17005739-17053843 chr2:16949616-17109966
amplification 2 17029791 17277260 247 chr2:16782322-17524728 chr2:15916180-18390870
1breakpoint 2 17271934 17282586 10 chr2:17261282-17293238 chr2:17224000-17330520
1breakpoint 3 116636936 116655935 18 chr3:116617937-116674933 chr3:116551440-116741430
loss 3 116646435 116939643 293 chr3:116353227-117232851 chr3:115326999-118259079
1breakpoint 3 116918402 116960885 42 chr3:116875919-117003367 chr3:116727228-117152058
1breakpoint 3 168233747 168272535 38 chr3:168194959-168311323 chr3:168059201-168447081
gain 3 168253141 181287117 13033 chr3:155219165-194321093 chr3:109600249-239940009
1breakpoint 3 181283743 181290492 6 chr3:181276994-181297240 chr3:181253372-181320862
loss 3 181287117 181974746 687 chr3:180599488-182662374 chr3:178192786-185069076
1breakpoint 3 181958418 181991075 32 chr3:181925761-182023731 chr3:181811461-182138031
1breakpoint 3 182573482 182613683 40 chr3:182533281-182653883 chr3:182392577-182794587
loss 3 182593582 186256402 3662 chr3:178930762-189919222 chr3:166110892-202739092
1breakpoint 3 186238966 186273839 34 chr3:186204093-186308711 chr3:186082037-186430767
1breakpoint 3 187705040 187712426 7 chr3:187697654-187719812 chr3:187671803-187745663
gain 3 187708733 187982368 273 chr3:187435098-188256002 chr3:186477375-189213725
1breakpoint 3 187979733 187985004 5 chr3:187974462-187990274 chr3:187956013-188008723
1breakpoint 4 15409103 15424591 15 chr4:15393615-15440079 chr4:15339407-15494287
gain 4 15416847 48858122 33441 chr4:1-82299396 chr4:1-199343859
1breakpoint 4 48834573 48881671 47 chr4:48787475-48928769 chr4:48622632-49093612
gain 5 28949 43157280 43128 chr5:1-86285610 chr5:1-237234769
1breakpoint 5 43150500 43164060 13 chr5:43136940-43177620 chr5:43089480-43225080
1breakpoint 6 27746590 27804160 57 chr6:27689020-27861730 chr6:27487525-28063225
gain 6 27775375 35920909 8145 chr6:19629841-44066443 chr6:1-72575812
1breakpoint 6 35891608 35950210 58 chr6:35833006-36008812 chr6:35627899-36213919
gain 6 35920909 57227407 21306 chr6:14614411-78533905 chr6:1-153106648
1breakpoint 6 57206230 57248584 42 chr6:57163876-57290938 chr6:57015637-57439177
1breakpoint 6 117791674 117795970 4 chr6:117787378-117800266 chr6:117772342-117815302
gain 6 117793822 122711943 4918 chr6:112875701-127630063 chr6:95662277-144843487
1breakpoint 6 122686228 122737659 51 chr6:122634797-122789089 chr6:122454788-122969098
1breakpoint 8 106080925 106102954 22 chr8:106058896-106124982 chr8:105981794-106202084
loss 8 106091939 146292734 40200 chr8:65891144-186493528 chr8:1-327196311
1breakpoint 9 9092345 9098121 5 chr9:9086569-9103897 chr9:9066353-9124113
loss 9 9095233 9798250 703 chr9:8392216-10501266 chr9:5931656-12961826
1breakpoint 9 9794490 9802010 7 chr9:9786970-9809530 chr9:9760650-9835850
1breakpoint 10 7412879 7461692 48 chr10:7364066-7510504 chr10:7193220-7681350
gain 10 7437285 9765948 2328 chr10:5108622-12094610 chr10:1-20244931
1breakpoint 10 9753869 9778028 24 chr10:9729710-9802186 chr10:9645153-9886743
1breakpoint 11 66118676 66128791 10 chr11:66108561-66138905 chr11:66073158-66174308
gain 11 66123733 134933972 68810 chr11:1-203744210 chr11:1-444580047
1breakpoint 14 89218815 89228569 9 chr14:89209061-89238323 chr14:89174922-89272462
gain 14 89223692 95718534 6494 chr14:82728850-102213376 chr14:59996903-124945323
1breakpoint 14 95691363 95745706 54 chr14:95637020-95800048 chr14:95446819-95990249
1breakpoint 15 41859152 41880619 21 chr15:41837685-41902085 chr15:41762550-41977220
1breakpoint 15 65526801 65539864 13 chr15:65513738-65552926 chr15:65468017-65598647
gain 15 65533332 102374592 36841 chr15:28692072-139215852 chr15:1-268160262
loss 17 18901 1365367 1346 chr17:1-2711833 chr17:1-7424464
1breakpoint 17 1282979 1447756 164 chr17:1118202-1612532 chr17:541482-2189252
1breakpoint 17 37977541 38010815 33 chr17:37944267-38044089 chr17:37827808-38160548
gain 17 37994178 81006629 43012 chr17:1-124019079 chr17:1-274562658
loss 18 220071 78014582 77794 chr18:1-155809092 chr18:1-428089881
1breakpoint 19 40933981 41006426 72 chr19:40861536-41078870 chr19:40607978-41332428
loss 19 40970203 59039699 18069 chr19:22900707-77109195 chr19:1-140352431
loss X 202664 123613841 123411 chrX:1-247025017 chrX:1-678964137
1breakpoint X 123613551 123614132 0 chrX:123612970-123614712 chrX:123610936-123616746
amplification X 123613841 123623262 9 chrX:123604420-123632682 chrX:123571446-123665656
1breakpoint X 123614132 123632392 18 chrX:123595872-123650652 chrX:123531962-123714562
loss X 123623262 154847489 31224 chrX:92399035-186071715 chrX:1-295356510
W3C standard HTML5 web site made by Toby Dylan Hocking using Emacs, Python, Pyramid, SegAnnot, Berkeley DB, D3.
Thanks to INRIA for hosting the server, and INRIA GForge for hosting the GPL-3 free software source code which runs this site.